Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0789KEGG: gfo:GFO_1876 hypothetical protein. (96 aa)    
Predicted Functional Partners:
Coch_0790
KEGG: gfo:GFO_1877 hypothetical protein.
       0.816
Coch_1744
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: fjo:Fjoh_1852 hypothetical protein.
  
     0.701
Coch_0356
PFAM: Colicin V production protein; KEGG: gfo:GFO_3421 colicin V production protein.
 
  
 0.691
Coch_1199
PFAM: zinc/iron permease; KEGG: fjo:Fjoh_2493 hypothetical protein.
  
     0.670
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.605
Coch_0009
PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: fps:FP1679 hypothetical protein.
  
    0.594
Coch_2012
KEGG: gfo:GFO_0621 secreted protein.
  
     0.569
Coch_1943
PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_2425 glycosyl transferase, group 1.
  
     0.542
rny
RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
       0.529
Coch_2148
KEGG: fps:FP0664 hypothetical protein.
  
     0.499
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.