Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0823PFAM: Peptidase M23; KEGG: gfo:GFO_3167 peptidase, family M23. (429 aa)    
Predicted Functional Partners:
Coch_1724
PFAM: Peptidase M23; KEGG: gfo:GFO_1878 secreted peptidase, family M23.
  
     0.540
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
    0.502
Coch_1474
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: gfo:GFO_3241 bifunctional transglycosylase/transpeptidase penicillin-binding protein.
  
  
 0.468
Coch_0824
Hypothetical protein.
       0.430
Coch_0825
KEGG: tde:TDE0309 putative lipoprotein.
       0.430
Coch_0822
TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: uue:UUR10_0587 DNA-cytosine methyltransferase.
  
    0.426
Coch_1120
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: gfo:GFO_1537 bifunctional transglycosylase/transpeptidase penicillin-binding protein.
  
   
 0.426
Coch_0821
KEGG: fjo:Fjoh_0653 hypothetical protein.
       0.415
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.