Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0833PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: gfo:GFO_3311 LysE type amino acid translocator. (221 aa)    
Predicted Functional Partners:
Coch_1875
KEGG: fjo:Fjoh_0451 hypothetical protein.
  
     0.735
Coch_1241
PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: fjo:Fjoh_1191 peptidase M1, membrane alanine aminopeptidase.
  
    0.684
Coch_1086
KEGG: fps:FP1062 hypothetical protein.
  
     0.683
Coch_0807
KEGG: gfo:GFO_3013 gliding motility protein GldM.
  
     0.658
Coch_0407
KEGG: gfo:GFO_0092 secreted protein.
  
     0.642
Coch_0806
KEGG: gfo:GFO_3012 gliding motility protein GldO.
  
     0.614
Coch_1769
KEGG: gfo:GFO_3422 hypothetical protein.
  
     0.613
Coch_1744
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: fjo:Fjoh_1852 hypothetical protein.
  
     0.604
Coch_1477
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: fps:FP0042 uroporphyrinogen-III synthase.
  
     0.591
Coch_1064
KEGG: gfo:GFO_2782 gliding motility protein GldB.
  
     0.570
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.