Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0875KEGG: pdi:BDI_0852 hypothetical protein. (314 aa)    
Predicted Functional Partners:
Coch_0876
KEGG: pdi:BDI_0853 hypothetical protein.
       0.807
Coch_1565
KEGG: fps:FP1130 chromosome partitioning protein ParB; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
 
 0.710
Coch_0874
Hypothetical protein.
       0.512
Coch_2162
KEGG: sma:SAV_14 hypothetical protein.
  
    0.500
Coch_0885
KEGG: pdi:BDI_0866 putative prophage Lp2 protein 26.
 
     0.497
Coch_0873
Hypothetical protein.
       0.496
Coch_0925
KEGG: pdi:BDI_1967 hypothetical protein.
  
     0.461
Coch_0877
KEGG: gfo:GFO_3043 hypothetical protein.
  
    0.447
Coch_1914
TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: plt:Plut_1930 addiction module toxin, Txe/YoeB.
  
     0.442
Coch_0903
Chromosome segregation ATPase-like protein; KEGG: wu:fc12e10; wu:fc12e10.
  
     0.441
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.