Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Coch_0893 | Coch_0895 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Hypothetical protein. | 0.629 |
Coch_0893 | Coch_0896 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Hypothetical protein; KEGG: gfo:GFO_2450 phage terminase large subunit. | 0.890 |
Coch_0893 | Coch_0897 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Hypothetical protein. | 0.629 |
Coch_0893 | Coch_0898 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Hypothetical protein. | 0.629 |
Coch_0893 | Coch_0899 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Hypothetical protein. | 0.629 |
Coch_0893 | Coch_0900 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | KEGG: aav:Aave_2893 hypothetical protein. | 0.629 |
Coch_0893 | Coch_0901 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Hypothetical protein. | 0.629 |
Coch_0893 | Coch_0902 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | KEGG: hypothetical protein. | 0.629 |
Coch_0893 | Coch_0903 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Chromosome segregation ATPase-like protein; KEGG: wu:fc12e10; wu:fc12e10. | 0.629 |
Coch_0893 | Coch_0904 | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | Hypothetical protein. | 0.629 |
Coch_0895 | Coch_0893 | Hypothetical protein. | PFAM: VRR-NUC domain protein; KEGG: cbk:CLL_A2280 VRR-NUC domain protein. | 0.629 |
Coch_0895 | Coch_0896 | Hypothetical protein. | Hypothetical protein; KEGG: gfo:GFO_2450 phage terminase large subunit. | 0.773 |
Coch_0895 | Coch_0897 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Coch_0895 | Coch_0898 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Coch_0895 | Coch_0899 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Coch_0895 | Coch_0900 | Hypothetical protein. | KEGG: aav:Aave_2893 hypothetical protein. | 0.773 |
Coch_0895 | Coch_0901 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Coch_0895 | Coch_0902 | Hypothetical protein. | KEGG: hypothetical protein. | 0.773 |
Coch_0895 | Coch_0903 | Hypothetical protein. | Chromosome segregation ATPase-like protein; KEGG: wu:fc12e10; wu:fc12e10. | 0.773 |
Coch_0895 | Coch_0904 | Hypothetical protein. | Hypothetical protein. | 0.773 |
page 1 of 6