Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Coch_0976PFAM: protein of unknown function DUF502; KEGG: aas:Aasi_0164 protein of unknown function DUF502. (206 aa)    
Predicted Functional Partners:
Coch_0978
Protein involved in gliding motility GldE; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: gfo:GFO_3578 gliding motility protein GldE.
       0.773
glsA
PFAM: Glutaminase, core; KEGG: gfo:GFO_2730 glutaminase; Belongs to the glutaminase family.
       0.765
Coch_0270
KEGG: fjo:Fjoh_1257 hypothetical protein.
  
     0.600
Coch_0300
KEGG: bth:BT_2504 hypothetical protein.
  
     0.600
Coch_0979
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: fps:FP1664 single-strand DNA-binding protein ssb.
       0.595
Coch_1488
KEGG: pcr:Pcryo_1454 putative site-specific recombinase.
  
     0.477
Coch_1137
KEGG: swo:Swol_0284 hypothetical protein.
  
    0.467
Coch_0400
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cch:Cag_1143 cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
     0.465
Coch_0980
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.462
Coch_1186
SMART: Tetratricopeptide domain protein; KEGG: fjo:Fjoh_2813 O-antigen polymerase.
  
     0.430
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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