Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0978Protein involved in gliding motility GldE; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: gfo:GFO_3578 gliding motility protein GldE. (431 aa)    
Predicted Functional Partners:
Coch_0976
PFAM: protein of unknown function DUF502; KEGG: aas:Aasi_0164 protein of unknown function DUF502.
       0.773
glsA
PFAM: Glutaminase, core; KEGG: gfo:GFO_2730 glutaminase; Belongs to the glutaminase family.
       0.773
Coch_1231
PFAM: Integral membrane protein TerC; KEGG: fps:FP0722 TerC family membrane protein.
      0.728
Coch_0979
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: fps:FP1664 single-strand DNA-binding protein ssb.
       0.626
Coch_0980
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.499
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.443
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.425
Coch_0982
KEGG: gfo:GFO_3292 hypothetical protein.
 
     0.420
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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