STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0983Hypothetical protein; KEGG: gfo:GFO_0093 conserved hypothetical protein, membrane. (207 aa)    
Predicted Functional Partners:
Coch_0261
KEGG: gfo:GFO_0089 membrane protein.
  
     0.771
Coch_1505
KEGG: gfo:GFO_3546 hypothetical protein.
  
     0.768
Coch_1878
KEGG: fjo:Fjoh_2510 hypothetical protein.
  
     0.765
Coch_1352
KEGG: gfo:GFO_2965 membrane protein.
  
     0.761
Coch_2190
KEGG: fps:FP1047 hypothetical protein.
  
    0.761
Coch_0775
KEGG: gfo:GFO_2979 secreted protein containing tetratricopeptide repeats.
 
     0.754
Coch_1791
KEGG: fjo:Fjoh_3471 hypothetical protein.
  
     0.752
Coch_1243
KEGG: gfo:GFO_3541 conserved hypothetical protein, secreted.
  
     0.751
Coch_1201
KEGG: gfo:GFO_1792 hypothetical protein.
  
     0.750
Coch_0331
Hypothetical protein; KEGG: gfo:GFO_2503 thiol-disulfide oxidoreductase.
  
    0.748
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.