Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tatA-2Sec-independent translocation protein mttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (77 aa)    
Predicted Functional Partners:
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
  0.923
tatC
Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
  
 0.908
Coch_1003
PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: gfo:GFO_2723 sec-independent protein translocase protein TatA/E.
  
  
 
0.900
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.858
Coch_1425
KEGG: gfo:GFO_0161 iron-sulfur binding oxidoreductase.
 
 
 0.543
Coch_1006
PFAM: Peptidase M23; KEGG: gfo:GFO_0229 peptidase, family M23.
       0.534
Coch_1007
PFAM: Protein of unknown function DUF695; protein of unknown function DUF1260; KEGG: fnu:FN0296 putative cytoplasmic protein.
       0.457
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.457
Coch_2191
PFAM: Rhomboid family protein; KEGG: bth:BT_2832 rhomboid family protein.
  
 
 0.444
Coch_1008
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gfo:GFO_0228 MerR family transcriptional regulator protein.
       0.436
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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