Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1017PFAM: glycoside hydrolase family 16; KEGG: fal:FRAAL6120 hypothetical protein. (261 aa)    
Predicted Functional Partners:
Coch_1016
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: xca:xccb100_3047 exported beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.729
Coch_1018
KEGG: bth:BT_3790 hypothetical protein.
       0.674
Coch_1009
PFAM: Glycoside hydrolase family 42 domain protein; KEGG: cma:Cmaq_0080 glycoside hydrolase family 42 protein.
 
     0.655
Coch_1021
PFAM: RagB/SusD domain protein; KEGG: bvu:BVU_1153 hypothetical protein.
 
     0.627
Coch_1020
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bth:BT_0364 hypothetical protein.
 
     0.592
Coch_1019
PFAM: RagB/SusD domain protein; KEGG: bth:BT_2821 hypothetical protein.
 
     0.538
Coch_1022
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_2818 hypothetical protein.
 
     0.531
Coch_0793
KEGG: ckl:CKL_0120 hypothetical protein.
  
     0.463
Coch_1433
KEGG: sse:Ssed_0364 hypothetical protein.
  
     0.456
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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