Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_1035PFAM: OmpA/MotB domain protein; KEGG: gfo:GFO_3374 OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats. (360 aa)    
Predicted Functional Partners:
Coch_1036
Hypothetical protein; KEGG: surface antigen BspA-like.
       0.631
Coch_1705
PFAM: OmpA/MotB domain protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein.
 
  
0.464
Coch_1284
PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat; KEGG: gfo:GFO_3374 OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats.
  
  
 
0.461
Coch_2112
PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gfo:GFO_1639 N-acetylmuramoyl-L-alanine amidase.
  
     0.435
Coch_0473
PFAM: polysaccharide export protein; protein of unknown function DUF1017; KEGG: bfs:BF1707 putative capsule polysaccharide export protein.
   
  0.419
Coch_1593
PFAM: OmpA/MotB domain protein; KEGG: gfo:GFO_2317 OmpA/MotB family outer membrane protein.
  
 
0.408
Coch_1700
PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; KEGG: fps:FP1169 OmpA family outer membrane protein.
 
  
0.407
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.