Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1073KEGG: fjo:Fjoh_2893 hypothetical protein. (497 aa)    
Predicted Functional Partners:
Coch_1074
PFAM: TonB-dependent receptor plug; KEGG: fjo:Fjoh_2894 TonB-dependent receptor, plug.
 
 
   0.958
Coch_1072
KEGG: fjo:Fjoh_2892 hypothetical protein.
 
    0.916
Coch_1071
KEGG: fjo:Fjoh_2891 hypothetical protein.
 
    0.911
Coch_0666
PFAM: TonB-dependent receptor plug; KEGG: fjo:Fjoh_3802 TonB-dependent receptor, plug.
  
     0.757
Coch_1388
KEGG: bfr:BF3612 hypothetical protein.
  
   0.710
Coch_1022
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_2818 hypothetical protein.
  
 
   0.591
Coch_0537
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pdi:BDI_1920 hypothetical protein.
 
 
   0.590
Coch_1387
PFAM: TonB-dependent receptor plug; KEGG: bfs:BF3412 putative outer membrane protein Omp117.
  
     0.590
Coch_1892
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_1042 hypothetical protein.
  
     0.588
Coch_0538
KEGG: bvu:BVU_0390 hypothetical protein.
  
     0.576
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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