Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1089TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: gfo:GFO_3059 nicotinamide mononucleotide transporter PnuC. (223 aa)    
Predicted Functional Partners:
Coch_1088
KEGG: pcr:Pcryo_1414 NadR-like protein.
 
   
 0.915
Coch_1090
KEGG: gfo:GFO_3060 hypothetical protein.
 
     0.789
Coch_1311
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fps:FP2370 TonB-dependent outer membrane receptorprecursor.
 
  
 0.543
Coch_1091
Hypothetical protein.
       0.481
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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