Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_1291KEGG: fjo:Fjoh_1789 hypothetical protein. (330 aa)    
Predicted Functional Partners:
Coch_1290
KEGG: bfs:BF0167 hypothetical protein.
       0.773
Coch_1292
PFAM: Bile acid:sodium symporter; KEGG: pdi:BDI_0245 putative sodium-dependent transporter.
       0.512
Coch_0513
KEGG: gfo:GFO_0898 conserved hypothetical protein, secreted.
  
     0.491
Coch_1548
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: fps:FP1402 hypothetical protein.
  
     0.488
Coch_0021
KEGG: gfo:GFO_0796 hypothetical protein.
  
     0.477
Coch_1289
PFAM: protein of unknown function DUF192; KEGG: tde:TDE0065 hypothetical protein.
       0.471
Coch_2029
SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_3274 hypothetical protein.
  
    0.461
Coch_1855
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gfo:GFO_0787 gliding motility protein GldI.
  
     0.456
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.452
Coch_1286
KEGG: fjo:Fjoh_1789 hypothetical protein.
 
    
0.442
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.