Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_1402PFAM: protein of unknown function DUF583; KEGG: fjo:Fjoh_1052 hypothetical protein. (148 aa)    
Predicted Functional Partners:
Coch_1401
KEGG: gfo:GFO_3272 membrane protein.
       0.808
Coch_1400
KEGG: gfo:GFO_3271 membrane protein.
       0.773
Coch_1006
PFAM: Peptidase M23; KEGG: gfo:GFO_0229 peptidase, family M23.
 
   
 0.676
Coch_1406
TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: gfo:GFO_2959 rod shape-determining protein MreC.
 
     0.560
Coch_1404
KEGG: gfo:GFO_2961 penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
     0.545
Coch_1407
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: fps:FP2417 rod shape-determining protein MreB.
     
 0.510
Coch_1042
KEGG: gfo:GFO_3290 secreted peptidase, family M23.
 
   
 0.502
Coch_1403
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.466
Coch_1405
TIGRFAM: rod shape-determining protein MreD; KEGG: gfo:GFO_2960 conserved hypothetical protein, membrane.
       0.457
Coch_2110
KEGG: fps:FP0400 hypothetical protein.
  
     0.436
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.