Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Coch_1633Protein involved in gliding motility SprA; KEGG: fjo:Fjoh_1653 hypothetical protein. (2360 aa)    
Predicted Functional Partners:
Coch_1258
KEGG: gfo:GFO_2891 conserved hypothetical protein, secreted.
  
 
 0.971
Coch_1439
KEGG: gfo:GFO_0399 hypothetical protein.
  
 
   0.968
Coch_2029
SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_3274 hypothetical protein.
  
 
 0.928
Coch_0808
KEGG: gfo:GFO_3014 gliding motility protein GldL.
  
   
 0.822
Coch_1748
KEGG: fps:FP0326 PorT protein.
  
   
 0.821
Coch_1358
PFAM: outer membrane chaperone Skp (OmpH); KEGG: fjo:Fjoh_1689 outer membrane chaperone Skp (OmpH).
  
 
   0.817
Coch_0809
PFAM: protein of unknown function DUF323; KEGG: gfo:GFO_3015 gliding motility protein GldK.
 
   
 0.813
Coch_0807
KEGG: gfo:GFO_3013 gliding motility protein GldM.
  
   
 0.782
Coch_1632
PFAM: protein of unknown function UPF0029; KEGG: fps:FP2027 hypothetical protein.
  
    0.778
Coch_0371
KEGG: fjo:Fjoh_1310 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; Exonuclease.
  
  
 0.776
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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