Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1653KEGG: fjo:Fjoh_1769 hypothetical protein. (239 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.718
Coch_0523
KEGG: fjo:Fjoh_4516 hypothetical protein.
  
     0.649
Coch_1978
Outer membrane transport energization protein TonB; KEGG: gfo:GFO_2900 hypothetical protein; TC 2.C.1.1.1.
 
   0.643
Coch_0909
KEGG: bth:BT_3742 hypothetical protein.
  
 
   0.623
Coch_1140
PFAM: RagB/SusD domain protein; KEGG: bfs:BF4247 hypothetical protein.
  
 
   0.617
Coch_0407
KEGG: gfo:GFO_0092 secreted protein.
  
     0.615
Coch_1728
KEGG: gfo:GFO_1569 secreted protein.
  
     0.606
Coch_0552
KEGG: fjo:Fjoh_2248 TonB-dependent receptor.
  
  
 0.587
Coch_0226
PFAM: RagB/SusD domain protein; KEGG: bth:BT_1762 hypothetical protein.
  
 
   0.570
Coch_0197
PFAM: RagB/SusD domain protein; KEGG: bfr:BF0953 hypothetical protein.
  
 
   0.562
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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