Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1670PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: gfo:GFO_1528 membrane protein containing DUF893. (730 aa)    
Predicted Functional Partners:
Coch_1671
PFAM: SUA5/yciO/yrdC domain; KEGG: gfo:GFO_2282 protein containing YrdC domain; Belongs to the SUA5 family.
       0.564
Coch_0153
KEGG: fjo:Fjoh_1009 hypothetical protein.
  
     0.526
Coch_1656
KEGG: fjo:Fjoh_2958 hypothetical protein.
  
   
 0.523
Coch_1055
KEGG: fjo:Fjoh_1339 hypothetical protein.
  
     0.477
Coch_0152
KEGG: fps:FP2495 hypothetical protein.
  
     0.437
Coch_1115
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; flavodoxin/nitric oxide synthase; PepSY- associated TM helix domain protein; KEGG: fjo:Fjoh_4069 flavodoxin/nitric oxide synthase.
 
   
 0.424
Coch_0608
KEGG: fps:FP0181 hypothetical protein.
  
     0.422
Coch_0281
KEGG: gfo:GFO_1614 membrane or secreted protein.
  
     0.420
Coch_0226
PFAM: RagB/SusD domain protein; KEGG: bth:BT_1762 hypothetical protein.
  
     0.418
Coch_1589
KEGG: fjo:Fjoh_2179 hypothetical protein.
  
     0.414
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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