Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1677PFAM: Heavy metal transport/detoxification protein; KEGG: fjo:Fjoh_1452 heavy metal transport/detoxification protein. (116 aa)    
Predicted Functional Partners:
Coch_1678
PFAM: TonB-dependent receptor; KEGG: fjo:Fjoh_1451 TonB-dependent receptor.
 
   
 0.897
Coch_0243
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gfo:GFO_1184 copper-translocating P-type ATPase.
  
 
 0.828
Coch_1230
PFAM: Sporulation domain protein; KEGG: fjo:Fjoh_0996 sporulation domain-containing protein.
  
     0.513
Coch_1675
KEGG: gfo:GFO_3145 hypothetical protein.
       0.505
Coch_1676
PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: bvu:BVU_2724 putative chaperone DnAJ.
       0.505
Coch_1954
Ribonuclease H-related protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.504
Coch_1679
KEGG: fjo:Fjoh_1450 hypothetical protein.
       0.443
Coch_1115
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; flavodoxin/nitric oxide synthase; PepSY- associated TM helix domain protein; KEGG: fjo:Fjoh_4069 flavodoxin/nitric oxide synthase.
 
   
 0.431
Coch_1987
KEGG: fjo:Fjoh_4068 hypothetical protein.
  
     0.429
Coch_1787
KEGG: asa:ASA_1832 hypothetical protein.
  
     0.427
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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