Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1680PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: fjo:Fjoh_0719 von Willebrand factor, type A. (333 aa)    
Predicted Functional Partners:
Coch_1682
KEGG: gfo:GFO_3411 hypothetical protein.
 
  
 0.933
Coch_1681
KEGG: gfo:GFO_3412 conserved hypothetical protein, membrane.
 
  
 0.894
Coch_1684
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: fjo:Fjoh_0715 ATPase.
 
  
 0.879
Coch_1536
KEGG: gfo:GFO_3416 aerotolerance-related protein BatD.
 
  
 0.801
Coch_1537
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_3415 aerotolerance-related protein BatC.
 
     0.768
Coch_1679
KEGG: fjo:Fjoh_1450 hypothetical protein.
       0.693
Coch_1535
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Variant SH3 domain protein; SH3 type 3 domain protein; SMART: Tetratricopeptide domain protein; KEGG: fps:FP0127 BatE protein.
 
   
 0.692
Coch_1683
Hypothetical protein.
       0.596
Coch_1678
PFAM: TonB-dependent receptor; KEGG: fjo:Fjoh_1451 TonB-dependent receptor.
       0.495
Coch_1538
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: gfo:GFO_3414 membrane protein containing von Willebrand factor (vWA) type A domain.
 
   
0.454
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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