Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1707Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: fjo:Fjoh_2546 propionyl-CoA carboxylase. (542 aa)    
Predicted Functional Partners:
Coch_0029
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.990
Coch_0035
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gfo:GFO_3368 enoyl-CoA hydratase/isomerase family protein.
 
 
 0.818
Coch_0730
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: fjo:Fjoh_1932 acyl-CoA dehydrogenase domain- containing protein.
 
 
 0.787
Coch_1887
TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: fps:FP0601 biotin--[acetyl-CoA-carboxylase] ligase.
  
 
 0.747
Coch_2105
PFAM: Transketolase domain protein; dehydrogenase E1 component; Transketolase central region; KEGG: fps:FP0719 putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits.
  
 
 0.638
mdh
Lactate/malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.610
Coch_0470
Hypothetical protein; KEGG: fjo:Fjoh_2213 pyruvate carboxyltransferase.
  
 
 0.607
Coch_2014
PFAM: AMP-dependent synthetase and ligase; KEGG: ank:AnaeK_3108 AMP-dependent synthetase and ligase.
 
 
 0.476
Coch_0969
KEGG: fjo:Fjoh_0367 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.461
Coch_0765
Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)); PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: fjo:Fjoh_1651 malic enzyme; phosphate acetyltransferase.
  
 
 0.402
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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