Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_1749KEGG: sus:Acid_4617 hypothetical protein. (203 aa)    
Predicted Functional Partners:
Coch_1748
KEGG: fps:FP0326 PorT protein.
       0.776
Coch_1750
KEGG: gfo:GFO_0784 conserved hypothetical protein, membrane.
       0.773
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.726
bshC
KEGG: fjo:Fjoh_4974 hypothetical protein; Belongs to the BshC family.
  
     0.645
Coch_0058
PFAM: protein of unknown function DUF1094; KEGG: fjo:Fjoh_0924 hypothetical protein; Belongs to the UPF0403 family.
  
     0.538
Coch_2072
PFAM: glycosyl transferase group 1; KEGG: hypothetical protein.
  
     0.520
Coch_0749
PFAM: Peptidase M23; KEGG: gfo:GFO_3257 secreted peptidase, family M23.
 
 
   0.506
Coch_2135
KEGG: gfo:GFO_1635 hypothetical protein.
  
     0.493
Coch_1746
TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); KEGG: hypothetical protein; K01078 acid phosphatase.
       0.487
Coch_1745
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: fps:FP0064 putative phosphoglycerate dehydrogenase.
       0.466
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.