Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Coch_1785KEGG: hypothetical protein; K08900 mitochondrial chaperone BCS1. (379 aa)    
Predicted Functional Partners:
Coch_1444
PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidylprolyl isomerase FKBP-type; KEGG: fps:FP1908 peptidyl-prolyl cis-trans isomerase PpiC.
  
 
 0.860
Coch_1854
PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidylprolyl isomerase FKBP-type; KEGG: gfo:GFO_0786 cyclophilin/FKBP-type peptidyl- prolyl cis-trans isomerase.
  
 
 0.860
Coch_1787
KEGG: asa:ASA_1832 hypothetical protein.
 
     0.844
Coch_1784
KEGG: bth:BT_1608 capsule biosynthesis protein CapA.
 
     0.804
Coch_1186
SMART: Tetratricopeptide domain protein; KEGG: fjo:Fjoh_2813 O-antigen polymerase.
 
     0.774
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.773
Coch_2029
SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_3274 hypothetical protein.
 
 0.767
Coch_1947
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicases; KEGG: pmo:Pmob_1535 helicase domain-containing protein.
 
 
 0.730
Coch_1137
KEGG: swo:Swol_0284 hypothetical protein.
  
     0.728
Coch_0349
Hypothetical protein; KEGG: pdi:BDI_3271 clostripain-related protein.
 
 
 
 0.718
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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