Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_1909PFAM: ATPase associated with various cellular activities AAA_5; KEGG: spw:SPCG_1052 endonuclease, putative. (795 aa)    
Predicted Functional Partners:
Coch_1910
McrBC 5-methylcytosine restriction system component-like protein; KEGG: pgi:PG0972 hypothetical protein.
 
 
 0.991
Coch_1911
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: fma:FMG_0285 putative methyltransferase.
       0.714
Coch_1907
Hypothetical protein.
       0.529
Coch_1908
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: gfo:GFO_1486 AsnC/Lrp family transcriptional regulator protein.
       0.529
Coch_1912
PFAM: Domain of unknown function DUF1877; KEGG: fnu:FN0339 hypothetical protein.
       0.525
Coch_1913
Hypothetical protein.
       0.480
Coch_1914
TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: plt:Plut_1930 addiction module toxin, Txe/YoeB.
       0.480
Coch_1906
KEGG: fps:FP0842 hypothetical protein.
 
     0.434
Coch_1915
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fps:FP1042 translation intitiation regulation protein.
  
    0.425
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.