Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Coch_1969KEGG: gfo:GFO_0515 hypothetical protein. (79 aa)    
Predicted Functional Partners:
cobB
PFAM: Silent information regulator protein Sir2; KEGG: fjo:Fjoh_5013 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
       0.773
Coch_1970
TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: fps:FP0537 orotidine-5'-phosphate decarboxylase.
       0.773
Coch_2148
KEGG: fps:FP0664 hypothetical protein.
  
     0.770
Coch_0151
KEGG: gfo:GFO_2393 hypothetical protein.
  
     0.768
Coch_1003
PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: gfo:GFO_2723 sec-independent protein translocase protein TatA/E.
  
     0.731
Coch_1932
KEGG: fps:FP1986 hypothetical protein.
  
     0.723
Coch_1855
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gfo:GFO_0787 gliding motility protein GldI.
  
     0.712
Coch_1551
KEGG: fjo:Fjoh_0265 hypothetical protein.
  
     0.710
Coch_0622
KEGG: gfo:GFO_3629 protein containing mevalonate and galactokinase signatures.
  
     0.699
Coch_0084
KEGG: fps:FP2012 hypothetical protein.
  
     0.694
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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