Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1987KEGG: fjo:Fjoh_4068 hypothetical protein. (163 aa)    
Predicted Functional Partners:
Coch_1115
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; flavodoxin/nitric oxide synthase; PepSY- associated TM helix domain protein; KEGG: fjo:Fjoh_4069 flavodoxin/nitric oxide synthase.
 
     0.837
Coch_1988
KEGG: tde:TDE1280 hypothetical protein.
       0.714
Coch_1883
KEGG: fps:FP0500 hypothetical protein.
  
     0.604
Coch_1986
PFAM: protein of unknown function DUF445; KEGG: mbb:BCG_0514 putative transmembrane protein.
       0.526
Coch_0294
Hypothetical protein; KEGG: fjo:Fjoh_2321 OmpA/MotB domain-containing protein.
  
     0.465
Coch_1678
PFAM: TonB-dependent receptor; KEGG: fjo:Fjoh_1451 TonB-dependent receptor.
  
     0.452
Coch_1677
PFAM: Heavy metal transport/detoxification protein; KEGG: fjo:Fjoh_1452 heavy metal transport/detoxification protein.
  
     0.429
Coch_0152
KEGG: fps:FP2495 hypothetical protein.
  
     0.416
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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