Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_1992KEGG: gfo:GFO_2697 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related. (216 aa)    
Predicted Functional Partners:
Coch_2102
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gfo:GFO_0587 CDP-diacylglycerol-serine O- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.983
Coch_2175
PFAM: phospholipase A1; KEGG: aci:ACIAD1354 putative phospholipase A1 precursor (PldA).
     
  0.900
Coch_1990
PFAM: protein of unknown function DUF28; KEGG: fps:FP0835 hypothetical protein.
       0.781
Coch_1991
KEGG: pph:Ppha_2477 CapA family protein.
       0.773
Coch_1989
PFAM: Protein of unknown function methylase putative; KEGG: gfo:GFO_1827 hypothetical protein.
       0.560
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.455
Coch_1445
KEGG: npu:Npun_F3689 CDP-alcohol phosphatidyltransferase.
   
 
 0.436
Coch_1580
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pmy:Pmen_0010 CDP-alcohol phosphatidyltransferase.
   
 
 0.436
Coch_1141
PFAM: band 7 protein; SMART: band 7 protein; KEGG: fjo:Fjoh_1007 band 7 protein.
    
   0.412
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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