Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2004PFAM: Septum formation initiator; KEGG: gfo:GFO_0811 hypothetical protein. (102 aa)    
Predicted Functional Partners:
Coch_0215
KEGG: gfo:GFO_2766 FtsQ-like cell division protein.
 
 
 
 0.908
Coch_2005
TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: gfo:GFO_0812 uridine kinase.
       0.816
Coch_1597
KEGG: fps:FP2062 peptidoglycan glycosyltransferase FtsI precursor; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; SMART: PASTA domain containing protein.
 
 
 0.730
Coch_2003
KEGG: ssa:SSA_1450 hypothetical protein.
       0.675
Coch_0324
Hypothetical protein; KEGG: gfo:GFO_1901 conserved hypothetical protein, secreted.
 
     0.673
Coch_0806
KEGG: gfo:GFO_3012 gliding motility protein GldO.
  
     0.660
Coch_1612
KEGG: gfo:GFO_2695 hypothetical protein.
  
     0.646
Coch_1334
PFAM: cell cycle protein; KEGG: fps:FP2058 cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.617
Coch_0982
KEGG: gfo:GFO_3292 hypothetical protein.
 
 
 0.595
Coch_1744
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: fjo:Fjoh_1852 hypothetical protein.
  
     0.566
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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