Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2015PFAM: sulfatase; KEGG: bfs:BF0802 putative secreted sulfatase. (497 aa)    
Predicted Functional Partners:
Coch_0016
Exo-alpha-sialidase; KEGG: bvu:BVU_4143 sialidase.
  
 
   0.666
Coch_2065
PFAM: Kelch repeat-containing protein; KEGG: bfr:BF1735 hypothetical protein.
  
     0.468
Coch_1034
Sialate O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase putative; lipolytic protein G-D-S-L family; KEGG: bfs:BF1809 sialate O-acetylesterase.
  
     0.456
Coch_0809
PFAM: protein of unknown function DUF323; KEGG: gfo:GFO_3015 gliding motility protein GldK.
 
   0.441
Coch_2063
N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase; KEGG: pdi:BDI_2941 N-acetylneuraminate lyase; Belongs to the DapA family.
  
     0.431
Coch_0783
KEGG: sun:SUN_2394 hypothetical protein.
  
     0.410
Coch_1327
PFAM: sulfatase; KEGG: pdi:BDI_3542 arylsulfatase precursor.
 
   
0.404
Coch_0200
KEGG: pdi:BDI_2833 ATP/GTP-binding site.
  
     0.400
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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