Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2087PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: fps:FP0336 electron transfer flavoprotein subunit beta. (248 aa)    
Predicted Functional Partners:
Coch_2088
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gfo:GFO_0292 electron transfer flavoprotein subunit alpha.
 0.999
Coch_0730
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: fjo:Fjoh_1932 acyl-CoA dehydrogenase domain- containing protein.
 
 
 0.987
Coch_0035
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gfo:GFO_3368 enoyl-CoA hydratase/isomerase family protein.
 
 
 0.789
Coch_0135
PFAM: tryptophan halogenase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; monooxygenase FAD- binding; FAD dependent oxidoreductase; KEGG: fps:FP2288 putative dehydrogenase/oxidoreductase.
  
 
 0.750
Coch_0136
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein.
  
 
 0.657
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
  
 0.653
dld
D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
  
 
 0.649
Coch_2114
KEGG: fps:FP0754 Fe-S oxidoreductase N-terminal region.
 
  
 0.640
Coch_0240
KEGG: fjo:Fjoh_0675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
  
  
 0.579
Coch_0507
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: fjo:Fjoh_4582 hypothetical protein.
 
  
 0.564
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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