Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2089PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: gfo:GFO_1008 phospholipid/glycerol acyltransferase. (264 aa)    
Predicted Functional Partners:
Coch_1969
KEGG: gfo:GFO_0515 hypothetical protein.
  
     0.638
Coch_0622
KEGG: gfo:GFO_3629 protein containing mevalonate and galactokinase signatures.
  
 
   0.602
Coch_1769
KEGG: gfo:GFO_3422 hypothetical protein.
  
     0.592
Coch_0306
PFAM: UbiA prenyltransferase; KEGG: gfo:GFO_3628 prenyltransferase family protein.
 
   
 0.571
Coch_1579
PFAM: phosphatidate cytidylyltransferase; KEGG: ypb:YPTS_1093 phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
 
  0.544
Coch_1613
PFAM: phosphatidate cytidylyltransferase; KEGG: gfo:GFO_2696 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.541
Coch_1477
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: fps:FP0042 uroporphyrinogen-III synthase.
  
    0.535
Coch_0151
KEGG: gfo:GFO_2393 hypothetical protein.
  
     0.518
Coch_0340
PFAM: Smr protein/MutS2; KEGG: gfo:GFO_1881 Smr domain protein-possibly involved in DNA repair.
 
     0.507
Coch_2148
KEGG: fps:FP0664 hypothetical protein.
  
     0.494
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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