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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Coch_2102PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gfo:GFO_0587 CDP-diacylglycerol-serine O- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (240 aa)    
Predicted Functional Partners:
Coch_1992
KEGG: gfo:GFO_2697 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related.
 
 
 0.982
Coch_1613
PFAM: phosphatidate cytidylyltransferase; KEGG: gfo:GFO_2696 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.925
Coch_1445
KEGG: npu:Npun_F3689 CDP-alcohol phosphatidyltransferase.
  
 
 0.916
Coch_1580
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pmy:Pmen_0010 CDP-alcohol phosphatidyltransferase.
  
 
 0.916
Coch_1579
PFAM: phosphatidate cytidylyltransferase; KEGG: ypb:YPTS_1093 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
  0.908
Coch_0944
TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: fnu:FN1411 threonine dehydratase.
    
  0.901
Coch_1829
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gfo:GFO_1794 cysteine synthase/cystathionine beta-synthase.
   
 
 0.901
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
  0.900
Coch_2109
KEGG: fjo:Fjoh_4709 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
  0.900
Coch_2175
PFAM: phospholipase A1; KEGG: aci:ACIAD1354 putative phospholipase A1 precursor (PldA).
     
  0.900
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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