Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2103PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gfo:GFO_2403 secreted protein. (277 aa)    
Predicted Functional Partners:
Coch_1505
KEGG: gfo:GFO_3546 hypothetical protein.
  
 
   0.884
Coch_2102
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gfo:GFO_0587 CDP-diacylglycerol-serine O- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.774
Coch_1359
PFAM: outer membrane chaperone Skp (OmpH); KEGG: gfo:GFO_0210 OmpH family outer membrane protein.
  
 
 0.735
Coch_1460
KEGG: fps:FP1615 hypothetical protein.
 
     0.735
Coch_0452
PFAM: surface antigen (D15); KEGG: gfo:GFO_0385 conserved hypothetical protein, secreted.
  
 
 0.734
Coch_1548
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: fps:FP1402 hypothetical protein.
  
 
 
 0.728
Coch_0278
KEGG: gfo:GFO_1098 secreted protein.
  
     0.718
Coch_1201
KEGG: gfo:GFO_1792 hypothetical protein.
  
     0.716
Coch_0776
KEGG: gfo:GFO_2980 conserved hypothetical protein, secreted.
  
 
 
 0.711
Coch_2029
SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_3274 hypothetical protein.
  
  0.708
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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