Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_2116PFAM: peptidase U32; KEGG: fjo:Fjoh_0903 peptidase U32. (416 aa)    
Predicted Functional Partners:
Coch_2117
KEGG: fjo:Fjoh_0902 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
     0.942
Coch_1874
KEGG: fps:FP0585 hypothetical protein.
  
  
 0.659
Coch_2051
PFAM: O-methyltransferase family 3; KEGG: fjo:Fjoh_1776 O-methyltransferase family protein.
  
  
 0.659
Coch_2118
KEGG: fjo:Fjoh_0127 hypothetical protein.
  
    0.586
Coch_0136
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein.
  
   0.557
Coch_2119
KEGG: fjo:Fjoh_1589 hypothetical protein.
  
    0.539
Coch_2120
KEGG: fps:FP2472 hypothetical protein.
       0.537
Coch_2115
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fjo:Fjoh_4996 ABC transporter related.
       0.500
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
    0.466
Coch_2114
KEGG: fps:FP0754 Fe-S oxidoreductase N-terminal region.
       0.465
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.