Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2131Cellulase; PFAM: glycoside hydrolase family 6; KEGG: msm:MSMEG_6752 endoglucanase A; Belongs to the glycosyl hydrolase family 6. (350 aa)    
Predicted Functional Partners:
Coch_2132
Cellulase; PFAM: glycoside hydrolase family 6; KEGG: mbb:BCG_0093 putative cellulase celA1 (endoglucanase); Belongs to the glycosyl hydrolase family 6.
 
  
 
0.954
Coch_0447
PFAM: glycoside hydrolase family 3 domain protein; KEGG: fjo:Fjoh_3389 glycoside hydrolase family 3 protein.
  
  
 0.917
Coch_1012
PFAM: glycoside hydrolase family 3 domain protein; KEGG: pdi:BDI_3068 beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.914
Coch_1132
PFAM: glycoside hydrolase family 3 domain protein; KEGG: pdi:BDI_3068 beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.914
Coch_0518
Cellulase; PFAM: glycoside hydrolase family 6; KEGG: mbb:BCG_0093 putative cellulase celA1 (endoglucanase); Belongs to the glycosyl hydrolase family 6.
  
  
 
0.907
Coch_0929
KEGG: fjo:Fjoh_4431 hypothetical protein.
      
 0.618
Coch_2006
PFAM: conserved hypothetical protein; KEGG: cbk:CLL_A1661 hypothetical protein.
  
     0.511
Coch_1013
KEGG: hau:Haur_0889 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.427
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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