Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2160Alpha-L-fucosidase; PFAM: coagulation factor 5/8 type domain protein; KEGG: fjo:Fjoh_2028 alpha-L-fucosidase. (690 aa)    
Predicted Functional Partners:
Coch_0071
KEGG: pdi:BDI_2423 glycoside hydrolase family protein.
 
  0.973
Coch_2161
PFAM: Abortive infection protein; KEGG: gfo:GFO_2309 hypothetical protein.
       0.774
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      
 0.618
Coch_0256
PFAM: oxidoreductase domain protein; KEGG: bvu:BVU_0340 putative oxidoreductase.
  
     0.579
Coch_2162
KEGG: sma:SAV_14 hypothetical protein.
       0.483
Coch_1198
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase-like; coagulation factor 5/8 type domain protein; KEGG: fjo:Fjoh_2039 beta-N-acetylhexosaminidase.
 
  
 0.473
Coch_0298
TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: pat:Patl_0120 putative alpha-1,2-mannosidase.
 
   
 0.471
Coch_1016
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: xca:xccb100_3047 exported beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.470
Coch_0590
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: bfs:BF1815 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.456
Coch_1807
Beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: fjo:Fjoh_2038 beta-galactosidase.
 
   
 0.449
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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