Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_2180Hypothetical protein; KEGG: fjo:Fjoh_2098 TonB-dependent receptor. (782 aa)    
Predicted Functional Partners:
Coch_2179
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: gfo:GFO_2165 dihydrolipoamide dehydrogenase.
       0.757
Coch_2172
KEGG: gfo:GFO_3478 hypothetical protein.
  
     0.725
Coch_1473
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: gfo:GFO_1711 TonB-dependent outer membrane receptor.
  
    0.576
Coch_1343
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bth:BT_3332 hypothetical protein.
  
     0.553
Coch_1739
KEGG: bth:BT_4200 hypothetical protein.
  
   0.547
Coch_0464
KEGG: gfo:GFO_0531 hypothetical protein.
  
     0.546
Coch_0196
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bfs:BF0871 hypothetical protein.
  
     0.532
Coch_1311
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: fps:FP2370 TonB-dependent outer membrane receptorprecursor.
  
     0.521
Coch_0776
KEGG: gfo:GFO_2980 conserved hypothetical protein, secreted.
  
     0.516
Coch_2062
PFAM: TonB-dependent receptor plug; KEGG: bfr:BF1710 hypothetical protein.
  
     0.505
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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