STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aaci_0536Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. (430 aa)    
Predicted Functional Partners:
Aaci_0534
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: sfu:Sfum_0264 transcriptional regulator, ArsR family.
 
  
 0.693
Aaci_0537
Arsenate reductase (thioredoxin); KEGG: hha:Hhal_0091 protein tyrosine phosphatase; TIGRFAM: arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
  
  
 0.681
Aaci_0538
PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_pKPN3p05928 N-acetyltransferase-like protein.
     
 0.661
Aaci_0535
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: scl:sce5616 lactoylglutathione lyase.
       0.588
Aaci_1583
PFAM: homocysteine S-methyltransferase; methylenetetrahydrofolate reductase; KEGG: pca:Pcar_0238 bifunctional homocysteine S- methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
 
   
 0.416
Your Current Organism:
Alicyclobacillus acidocaldarius DSM 446
NCBI taxonomy Id: 521098
Other names: A. acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius ATCC 27009, Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius IFO 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius JCM 5260, Alicyclobacillus acidocaldarius subsp. acidocaldarius NBRC 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius NCIB 11725, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain DSM 446
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