STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aaci_0579PFAM: SAF domain protein; KEGG: acp:A2cp1_3006 Flp pilus assembly protein CpaB. (264 aa)    
Predicted Functional Partners:
Aaci_0578
Chromosome partitioning ATPase-like protein protein; KEGG: lch:Lcho_0698 cobyrinic acid ac-diamide synthase.
       0.773
Aaci_0580
PFAM: type II secretion system protein E; KEGG: bba:Bd0111 Flp pilus assembly protein TadA.
       0.773
Aaci_0581
Hypothetical protein; KEGG: rpf:Rpic12D_0544 type II secretion system protein.
       0.773
Aaci_0582
Hypothetical protein.
       0.773
Aaci_0583
Hypothetical protein.
       0.741
Aaci_0584
Hypothetical protein.
       0.741
Aaci_0577
Hypothetical protein; KEGG: spen; split ends.
       0.592
Aaci_0575
Type IV secretory pathway VirB4 protein-like protein; KEGG: ajs:Ajs_4178 hypothetical protein.
       0.486
Aaci_0576
Hypothetical protein; KEGG: proteophosphoglycan 5.
       0.486
Aaci_0585
Hypothetical protein.
       0.408
Your Current Organism:
Alicyclobacillus acidocaldarius DSM 446
NCBI taxonomy Id: 521098
Other names: A. acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius ATCC 27009, Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius IFO 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius JCM 5260, Alicyclobacillus acidocaldarius subsp. acidocaldarius NBRC 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius NCIB 11725, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain DSM 446
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