STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aaci_0718PFAM: protein of unknown function DUF1657. (68 aa)    
Predicted Functional Partners:
Aaci_0719
PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: hypothetical protein.
 
     0.855
Aaci_1004
Hypothetical protein.
  
     0.747
Aaci_0087
PFAM: protein of unknown function UPF0180.
 
     0.683
Aaci_0721
TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
 
     0.648
Aaci_2158
Hypothetical protein.
  
     0.615
Aaci_0720
TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
       0.589
Aaci_0722
TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein.
       0.589
Aaci_1256
Hypothetical protein; Belongs to the UPF0342 family.
 
     0.509
Aaci_2367
Hypothetical protein.
  
    0.493
Aaci_1734
Hypothetical protein.
  
     0.483
Your Current Organism:
Alicyclobacillus acidocaldarius DSM 446
NCBI taxonomy Id: 521098
Other names: A. acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius ATCC 27009, Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius IFO 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius JCM 5260, Alicyclobacillus acidocaldarius subsp. acidocaldarius NBRC 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius NCIB 11725, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain DSM 446
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.