Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aaci_1508 | Aaci_1554 | Aaci_1508 | Aaci_1554 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein. | PFAM: Integrase catalytic region; KEGG: bgl:bglu_3p0780 integrase. | 0.826 |
Aaci_1508 | Aaci_2924 | Aaci_1508 | Aaci_2924 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.765 |
Aaci_1508 | polA | Aaci_1508 | Aaci_2345 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.433 |
Aaci_1554 | Aaci_1508 | Aaci_1554 | Aaci_1508 | PFAM: Integrase catalytic region; KEGG: bgl:bglu_3p0780 integrase. | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein. | 0.826 |
Aaci_2924 | Aaci_1508 | Aaci_2924 | Aaci_1508 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein. | 0.765 |
Aaci_2924 | polA | Aaci_2924 | Aaci_2345 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.536 |
polA | Aaci_1508 | Aaci_2345 | Aaci_1508 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein. | 0.433 |
polA | Aaci_2924 | Aaci_2345 | Aaci_2924 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.536 |