STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aaci_1938PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gur:Gura_2163 cytochrome bd ubiquinol oxidase, subunit I. (461 aa)    
Predicted Functional Partners:
Aaci_1937
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: dol:Dole_2650 cytochrome d ubiquinol oxidase, subunit II.
 
 0.999
Aaci_1936
KEGG: afr:AFE_1388 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
  
 0.983
Aaci_1935
KEGG: spe:Spro_1677 cysteine/glutathione ABC transporter membrane/ATP-binding component; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.856
Aaci_1861
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mxa:MXAN_3540 succinate dehydrogenase iron- sulfur subunit.
     
 0.594
Aaci_2008
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cla:Cla_0908 NADH dehydrogenase.
 
   
 0.592
Aaci_1862
TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mxa:MXAN_3539 succinate dehydrogenase flavoprotein subunit.
     
 0.563
Aaci_2524
PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase.
   
 
 0.561
Aaci_0845
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1888 NADH dehydrogenase.
 
   
 0.507
Aaci_1940
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: shn:Shewana3_2937 MarR family transcriptional regulator.
  
    0.434
Aaci_1939
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_5401 probably multidrug resistance membrane translocase.
     
 0.431
Your Current Organism:
Alicyclobacillus acidocaldarius DSM 446
NCBI taxonomy Id: 521098
Other names: A. acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius ATCC 27009, Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius IFO 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius JCM 5260, Alicyclobacillus acidocaldarius subsp. acidocaldarius NBRC 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius NCIB 11725, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain DSM 446
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.