STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aaci_2152PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_0168 hypothetical protein. (326 aa)    
Predicted Functional Partners:
Aaci_0167
Hypothetical protein.
  
   0.541
Aaci_2178
PFAM: Aldose 1-epimerase; KEGG: pla:Plav_1886 aldose 1-epimerase.
  
     0.532
Aaci_2192
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF1232; SMART: helix-turn-helix domain protein; KEGG: scl:sce0455 Cro/CI family transcriptional regulator.
  
     0.490
Aaci_0975
Hypothetical protein.
  
     0.481
Aaci_1911
Hypothetical protein.
  
     0.425
Aaci_2673
PFAM: lipolytic protein G-D-S-L family; KEGG: afw:Anae109_0069 GDSL family lipase.
  
     0.420
Aaci_1255
PFAM: protein of unknown function DUF1292; KEGG: hypothetical protein; Belongs to the UPF0473 family.
  
     0.416
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.415
Aaci_2660
Hypothetical protein.
  
     0.406
Your Current Organism:
Alicyclobacillus acidocaldarius DSM 446
NCBI taxonomy Id: 521098
Other names: A. acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius ATCC 27009, Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius IFO 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius JCM 5260, Alicyclobacillus acidocaldarius subsp. acidocaldarius NBRC 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius NCIB 11725, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain DSM 446
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.