STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB12027.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
SCB35238.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.833
SCB39298.1
Uncharacterized membrane protein.
  
    0.728
SCB16641.1
Hypothetical protein.
  
     0.697
SCB12020.1
Hypothetical protein.
    
0.608
SCB12031.1
DNA-binding transcriptional regulator, ArsR family.
       0.561
SCB07620.1
ABC-2 type transport system permease protein.
   
  
 0.487
SCB18934.1
ABC-2 type transport system permease protein.
   
  
 0.487
SCB18940.1
ABC-2 type transport system permease protein.
   
  
 0.487
SCB12024.1
Thiamine-phosphate pyrophosphorylase.
       0.480
Your Current Organism:
Rhizobium hainanense
NCBI taxonomy Id: 52131
Other names: CCBAU 57015, CIP 105503, DSM 11917, R. hainanense, strain I66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.