Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCB26762.1Peptide/nickel transport system substrate-binding protein. (531 aa)    
Predicted Functional Partners:
SCB26768.1
Peptide/nickel transport system permease protein.
 
  0.979
SCB26771.1
Peptide/nickel transport system permease protein.
 
  0.960
SCB21936.1
Peptide/nickel transport system permease protein.
  
  0.907
SCB26779.1
Peptide/nickel transport system ATP-binding protein.
 
 
  0.900
SCB26776.1
Peptide/nickel transport system ATP-binding protein.
 
  0.894
SCB21939.1
Peptide/nickel transport system permease protein.
  
  0.871
SCB19402.1
Peptide/nickel transport system permease protein.
  
  0.846
SCB19407.1
Peptide/nickel transport system permease protein.
  
  0.825
SCB25428.1
Peptide/nickel transport system substrate-binding protein.
  
  
  0.800
SCB21945.1
Peptide/nickel transport system ATP-binding protein.
  
  0.781
Your Current Organism:
Rhizobium hainanense
NCBI taxonomy Id: 52131
Other names: CCBAU 57015, CIP 105503, DSM 11917, R. hainanense, strain I66
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