STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB35064.1Peptide/nickel transport system substrate-binding protein. (516 aa)    
Predicted Functional Partners:
SCB35053.1
Peptide/nickel transport system permease protein.
  0.900
SCB35058.1
Peptide/nickel transport system permease protein.
 
  0.887
SCB35066.1
Succinyl-diaminopimelate desuccinylase.
 
     0.829
SCB25859.1
Peptide/nickel transport system permease protein.
 
  0.824
SCB25862.1
Peptide/nickel transport system permease protein.
 
  0.810
SCB34952.1
Peptide/nickel transport system permease protein.
 
  0.795
SCB35043.1
Acetylornithine deacetylase.
 
     0.777
SCB34958.1
Peptide/nickel transport system permease protein.
 
  0.766
SCB36542.1
Peptide/nickel transport system permease protein.
 
  0.766
SCB36547.1
Peptide/nickel transport system permease protein.
  
  0.673
Your Current Organism:
Rhizobium hainanense
NCBI taxonomy Id: 52131
Other names: CCBAU 57015, CIP 105503, DSM 11917, R. hainanense, strain I66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.