STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403775_00420Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_001403775_01405
Unannotated protein.
   
 
 0.983
GCA_001403775_01439
Unannotated protein.
 
 
 0.983
GCA_001403775_01044
Unannotated protein.
   
 
 0.976
GCA_001403775_00410
Unannotated protein.
  
 
 0.974
GCA_001403775_01043
Unannotated protein.
   
 
 0.974
GCA_001403775_01306
Unannotated protein.
  
   0.973
GCA_001403775_01445
Unannotated protein.
  
 
 0.971
GCA_001403775_01885
Unannotated protein.
   
 
 0.971
GCA_001403775_01002
Unannotated protein.
   
   0.969
GCA_001403775_01026
Unannotated protein.
   
 
 0.969
Your Current Organism:
Helcobacillus massiliensis
NCBI taxonomy Id: 521392
Other names: CCUG 53859, CIP 109418, CSUR P17, DSM 23040, H. massiliensis, Helcobacillus massiliensis Renvoise et al. 2009, strain 6401990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.