STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403775_00485Unannotated protein. (290 aa)    
Predicted Functional Partners:
GCA_001403775_01891
Unannotated protein.
  
 0.929
GCA_001403775_01467
Unannotated protein.
  
 0.879
GCA_001403775_00486
Unannotated protein.
       0.770
GCA_001403775_00988
Unannotated protein.
    
 
 0.762
GCA_001403775_00487
Unannotated protein.
       0.748
GCA_001403775_00248
Unannotated protein.
  
 
 0.743
GCA_001403775_01912
Unannotated protein.
 
     0.737
GCA_001403775_01322
Unannotated protein.
 
     0.719
GCA_001403775_00488
Unannotated protein.
 
     0.682
GCA_001403775_00760
Unannotated protein.
  
 
 0.674
Your Current Organism:
Helcobacillus massiliensis
NCBI taxonomy Id: 521392
Other names: CCUG 53859, CIP 109418, CSUR P17, DSM 23040, H. massiliensis, Helcobacillus massiliensis Renvoise et al. 2009, strain 6401990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.