STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403775_00733Unannotated protein. (454 aa)    
Predicted Functional Partners:
GCA_001403775_00734
Unannotated protein.
 
 
 0.999
GCA_001403775_01396
Unannotated protein.
 
 
 0.951
GCA_001403775_00232
Unannotated protein.
  
 
 0.926
GCA_001403775_00506
Unannotated protein.
  
 0.922
GCA_001403775_01331
Unannotated protein.
  
 
 0.921
GCA_001403775_01401
Unannotated protein.
 
 
 0.911
GCA_001403775_00970
Unannotated protein.
  
 0.906
GCA_001403775_00884
Unannotated protein.
  
 
  0.898
GCA_001403775_01800
Unannotated protein.
     
 0.887
GCA_001403775_01384
Unannotated protein.
 
 
 0.876
Your Current Organism:
Helcobacillus massiliensis
NCBI taxonomy Id: 521392
Other names: CCUG 53859, CIP 109418, CSUR P17, DSM 23040, H. massiliensis, Helcobacillus massiliensis Renvoise et al. 2009, strain 6401990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.