STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403775_02017Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_001403775_01548
Unannotated protein.
  
 0.924
GCA_001403775_02018
Unannotated protein.
     
 0.775
GCA_001403775_00816
Unannotated protein.
  
 
 0.773
GCA_001403775_01549
Unannotated protein.
  
  
 0.615
GCA_001403775_02019
Unannotated protein.
       0.547
GCA_001403775_01764
Unannotated protein.
  
 0.517
GCA_001403775_00845
Unannotated protein.
  
  
 0.492
GCA_001403775_01467
Unannotated protein.
   
 0.415
Your Current Organism:
Helcobacillus massiliensis
NCBI taxonomy Id: 521392
Other names: CCUG 53859, CIP 109418, CSUR P17, DSM 23040, H. massiliensis, Helcobacillus massiliensis Renvoise et al. 2009, strain 6401990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.